Bradi3g38600

Description : homeobox protein 5

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g38600
Cluster	HCCA clusters: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
A4A49_39997	No alias	homeobox-leucine zipper protein athb-13	0.02	Orthogroups_2024-Update
At1g26960	No alias	Homeobox-leucine zipper protein ATHB-23...	0.02	Orthogroups_2024-Update
Bradi1g71930	No alias	homeobox 3	0.06	Orthogroups_2024-Update
Bradi4g29380	No alias	homeobox 1	0.04	Orthogroups_2024-Update
Bradi4g35910	No alias	homeobox 7	0.06	Orthogroups_2024-Update
Brara.B00111.1	No alias	regulatory protein *(LMI1) of floral meristem identity...	0.04	Orthogroups_2024-Update
Brara.B00590.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B01882.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Brara.E03620.1	No alias	HD-ZIP I/II-type transcription factor	0.06	Orthogroups_2024-Update
Brara.F02402.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.01G177500	No alias	homeobox protein 40	0.02	Orthogroups_2024-Update
Glyma.04G174467	No alias	homeobox protein 5	0.02	Orthogroups_2024-Update
Glyma.04G231400	No alias	homeobox 7	0.05	Orthogroups_2024-Update
Glyma.13G169900	No alias	homeobox 1	0.03	Orthogroups_2024-Update
HORVU4Hr1G078410.2	No alias	HD-ZIP I/II-type transcription factor	0.07	Orthogroups_2024-Update
MA_130615g0020	No alias	(at2g22430 : 152.0) Encodes a homeodomain leucine zipper...	0.04	Orthogroups_2024-Update
MA_169305g0010	No alias	(at2g22430 : 149.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
MA_19453g0040	No alias	(at3g01470 : 183.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00017541-RA	No alias	(at2g22430 : 139.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
Potri.005G161500	No alias	homeobox protein 16	0.03	Orthogroups_2024-Update
Potri.008G194400	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Potri.010G093400	No alias	Homeobox-leucine zipper protein family	0.02	Orthogroups_2024-Update
Pp1s154_145V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.01	Orthogroups_2024-Update
Pp1s28_54V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.05	Orthogroups_2024-Update
Pp1s31_96V6	No alias	dna-binding protein	0.02	Orthogroups_2024-Update
Pp1s77_184V6	No alias	No description available	0.01	Orthogroups_2024-Update
Seita.1G253700.1	No alias	HD-ZIP I/II-type transcription factor	0.05	Orthogroups_2024-Update
Seita.2G284000.1	No alias	HD-ZIP I/II-type transcription factor	0.06	Orthogroups_2024-Update
Seita.9G524200.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G488900.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G189000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G272900.1	No alias	HD-ZIP I/II-type transcription factor	0.1	Orthogroups_2024-Update
Solyc03g082550	No alias	Homeobox leucine zipper (AHRD V3.3 - J7FWS7_ROSRU)	0.04	Orthogroups_2024-Update
Solyc04g074700	No alias	LES17306 homeodomain protein	0.03	Orthogroups_2024-Update
Solyc05g006980	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen02g032560	No alias	Homeobox domain	0.02	Orthogroups_2024-Update
Sopen07g031010	No alias	Homeobox domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	106	147
IPR001356	Homeobox_dom	51	104

External Links

No external refs found!

Bradi3g38600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation