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  5. Bradi3g39110

Bradi3g39110


Description : RING/U-box superfamily protein


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g39110
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Brara.C02675.1 No alias E3 ubiquitin ligase *(BRH) 0.02 Orthogroups_2024-Update
GRMZM2G045398 No alias brassinosteroid-responsive RING-H2 0.02 Orthogroups_2024-Update
Glyma.02G223600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G066050.3 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
LOC_Os07g48680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10023352g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_10266950g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10433991g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_130176g0010 No alias (at5g20885 : 80.5) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_788323g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.005G081200 No alias RING-H2 finger A2A 0.02 Orthogroups_2024-Update
Potri.010G133300 No alias brassinosteroid-responsive RING-H2 0.02 Orthogroups_2024-Update
Seita.4G006300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G025900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G152000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 94 137
No external refs found!