Sopen07g006280

Description : RED-like protein N-terminal region

Gene families : OG_42_0005052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005052_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g006280
Cluster	HCCA clusters: Cluster_347

Target	Alias	Description	ECC score	Gene Family Method
Glyma.09G074100	No alias	RED family protein	0.02	Orthogroups_2024-Update
Glyma.15G183100	No alias	RED family protein	0.03	Orthogroups_2024-Update
Kfl00076_0020	kfl00076_0020_v1.1	(at2g26460 : 348.0) Encodes SMU2, a protein involved in...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012916	RED_N	8	224
IPR012492	RED_C	438	544

External Links

No external refs found!