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  5. Bradi3g40030

Bradi3g40030


Description : squamosa promoter binding protein-like 9


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g40030
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
A4A49_19670 No alias squamosa promoter-binding-like protein 6 0.02 Orthogroups_2024-Update
At2g33810 No alias Squamosa promoter-binding-like protein 3... 0.03 Orthogroups_2024-Update
Brara.F00135.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G109500 No alias squamosa promoter binding protein-like 9 0.03 Orthogroups_2024-Update
Glyma.12G162999 No alias squamosa promoter-binding protein-like 12 0.03 Orthogroups_2024-Update
PSME_00041406-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.015G060400 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 81 154
No external refs found!