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  5. Bradi3g40180

Bradi3g40180


Description : AT hook motif DNA-binding family protein


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g40180
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AC225193.3_FG003 No alias AT hook motif DNA-binding family protein 0.02 Orthogroups_2024-Update
At1g63470 No alias AT-hook motif nuclear-localized protein 5... 0.03 Orthogroups_2024-Update
Bradi5g19900 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.03G011200 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.07G072300 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.09G260600 No alias AT hook motif DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.11G023900 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.16G204400 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.18G231300 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G051150.7 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g22030 No alias AT hook motif domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g40150 No alias AT hook motif domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.002G158200 No alias AT hook motif DNA-binding family protein 0.02 Orthogroups_2024-Update
Pp1s157_16V6 No alias dna binding 0.02 Orthogroups_2024-Update
Seita.4G141100.1 No alias AHL clade-B transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G020300.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 178 293
No external refs found!