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  5. Bradi3g41250

Bradi3g41250


Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g41250
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
A4A49_21887 No alias squamosa promoter-binding-like protein 9 0.03 Orthogroups_2024-Update
MA_47367g0010 No alias (at1g02065 : 173.0) Encodes an SBP-box gene, a member of... 0.05 Orthogroups_2024-Update
Seita.6G223300.1 No alias SBP-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.002G257900.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G247700.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc05g012040 No alias Squamosa promoter binding protein 6b 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 120 193
No external refs found!