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  5. Bradi3g41430

Bradi3g41430


Description : cobalt ion binding


Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g41430
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
At1g32580 No alias Multiple organellar RNA editing factor 5,... 0.02 Orthogroups_2024-Update
At3g06790 No alias Multiple organellar RNA editing factor 3, mitochondrial... 0.02 Orthogroups_2024-Update
Brara.A01086.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Brara.C03552.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Brara.D02033.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
Brara.E01050.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.F00767.1 No alias RNA editing factor *(MORF) 0.06 Orthogroups_2024-Update
Brara.G00411.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Brara.H02711.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
GRMZM2G003765 No alias plastid developmental protein DAG, putative 0.05 Orthogroups_2024-Update
GRMZM2G383540 No alias plastid developmental protein DAG, putative 0.07 Orthogroups_2024-Update
GRMZM5G808811 No alias differentiation and greening-like 1 0.04 Orthogroups_2024-Update
Glyma.10G005100 No alias differentiation and greening-like 1 0.03 Orthogroups_2024-Update
Glyma.10G183800 No alias differentiation and greening-like 1 0.03 Orthogroups_2024-Update
Glyma.15G064300 No alias plastid developmental protein DAG, putative 0.04 Orthogroups_2024-Update
HORVU4Hr1G016440.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
HORVU7Hr1G008880.2 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
HORVU7Hr1G054850.2 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
LOC_Os06g02600 No alias DAG protein, chloroplast precursor, putative, expressed 0.05 Orthogroups_2024-Update
Seita.4G211100.1 No alias RNA editing factor *(MORF) 0.12 Orthogroups_2024-Update
Seita.7G238200.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sopen02g024540 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!