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  5. Bradi3g42910

Bradi3g42910


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0005800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g42910
Cluster HCCA clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G198100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Orthogroups_2024-Update
PSME_00008848-RA No alias (at3g11540 : 1151.0) Encodes a N-acetyl glucosamine... 0.05 Orthogroups_2024-Update
Solyc09g010180 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001440 TPR_1 325 358
IPR001440 TPR_1 216 249
IPR019734 TPR_repeat 393 425
IPR019734 TPR_repeat 182 208
IPR019734 TPR_repeat 291 322
IPR029489 OGT/SEC/SPY_C 647 837
IPR029489 OGT/SEC/SPY_C 480 629
No external refs found!