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  5. Bradi3g43210

Bradi3g43210


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g43210
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
101239 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
At1g17630 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
At2g39620 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.03 Orthogroups_2024-Update
At4g14820 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.04 Orthogroups_2024-Update
At4g30700 No alias MEF29 [Source:UniProtKB/TrEMBL;Acc:A0A178UUW3] 0.03 Orthogroups_2024-Update
At4g33170 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Orthogroups_2024-Update
Bradi4g22520 No alias mitochondrial editing factor 22 0.03 Orthogroups_2024-Update
GRMZM2G111780 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G078800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os07g39090 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
MA_80970g0010 No alias (at1g11290 : 615.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_9989604g0010 No alias (at4g18750 : 575.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Potri.014G097000 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Solyc04g063270 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0019867 outer membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 186 212
IPR002885 Pentatricopeptide_repeat 112 142
IPR002885 Pentatricopeptide_repeat 214 243
IPR002885 Pentatricopeptide_repeat 491 513
IPR002885 Pentatricopeptide_repeat 388 408
IPR002885 Pentatricopeptide_repeat 83 107
IPR002885 Pentatricopeptide_repeat 312 361
IPR002885 Pentatricopeptide_repeat 416 462
No external refs found!