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  5. Bradi3g43490

Bradi3g43490


Description : RmlC-like cupins superfamily protein


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g43490
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Bradi1g11920 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g15190 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g17316 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g43650 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00896.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I04761.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G017170.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g29020 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10308226g0010 No alias (at1g09560 : 231.0) germin-like protein (GLP5);... 0.02 Orthogroups_2024-Update
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.01 Orthogroups_2024-Update
Seita.1G180600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G039000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G129700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G059100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 211
No external refs found!