1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi3g45230

Bradi3g45230


Description : RNA-metabolising metallo-beta-lactamase family protein


Gene families : OG_42_0003719 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003719_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g45230
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G134439 No alias RNA-metabolising metallo-beta-lactamase family protein 0.02 Orthogroups_2024-Update
Glyma.04G194600 No alias RNA-metabolising metallo-beta-lactamase family protein 0.03 Orthogroups_2024-Update
Glyma.06G171400 No alias RNA-metabolising metallo-beta-lactamase family protein 0.06 Orthogroups_2024-Update
Glyma.17G128500 No alias RNA-metabolising metallo-beta-lactamase family protein 0.04 Orthogroups_2024-Update
Kfl00045_0380 kfl00045_0380_v1.1 (at5g63420 : 749.0) embryo defective 2746 (emb2746);... 0.02 Orthogroups_2024-Update
LOC_Os02g33610 No alias metallo-beta-lactamase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.012G095800 No alias RNA-metabolising metallo-beta-lactamase family protein 0.03 Orthogroups_2024-Update
Potri.015G093600 No alias RNA-metabolising metallo-beta-lactamase family protein 0.03 Orthogroups_2024-Update
Pp1s192_99V6 No alias MLE2.5; hydrolase family [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.1G185600.1 No alias exoribonuclease *(RNase J) 0.08 Orthogroups_2024-Update
Sobic.004G070200.1 No alias exoribonuclease *(RNase J) 0.03 Orthogroups_2024-Update
Solyc03g111260 No alias Ribonuclease J (AHRD V3.3 *** A0A0B0P255_GOSAR) 0.04 Orthogroups_2024-Update
Sopen03g030390 No alias Metallo-beta-lactamase superfamily 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 109 244
IPR011108 RMMBL 442 471
No external refs found!