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  5. Bradi3g45240

Bradi3g45240


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g45240
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
110074 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
427312 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
A4A49_23210 No alias compass-like h3k4 histone methylase component wdr5a 0.02 Orthogroups_2024-Update
Bradi5g26250 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G147400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
MA_18161g0010 No alias (at3g15470 : 336.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Mp7g16950.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.01 Orthogroups_2024-Update
Seita.7G176800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc07g063330 No alias WD-repeat protein, putative (AHRD V3.3 *** B9T7M5_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 303 339
IPR001680 WD40_repeat 345 381
IPR001680 WD40_repeat 221 251
No external refs found!