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  5. Bradi3g45250

Bradi3g45250


Description : CYS, MET, PRO, and GLY protein 2


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g45250
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
A4A49_33780 No alias e3 ubiquitin-protein ligase pub23 0.03 Orthogroups_2024-Update
Glyma.02G196301 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Glyma.03G202600 No alias plant U-box 22 0.04 Orthogroups_2024-Update
Kfl00719_0040 kfl00719_0040_v1.... "(at1g66160 : 82.4) ""CYS, MET, PRO, and GLY protein 1""... 0.02 Orthogroups_2024-Update
MA_10432179g0010 No alias (at3g52450 : 121.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
Mp3g11730.1 No alias E3 ubiquitin ligase (PUB) 0.02 Orthogroups_2024-Update
Mp7g11000.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
Seita.3G007200.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Seita.4G109000.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 21 89
No external refs found!