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  5. Bradi3g45380

Bradi3g45380


Description : plant U-box 25


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g45380
Cluster HCCA clusters: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
At3g18710 No alias RING-type E3 ubiquitin transferase... 0.02 Orthogroups_2024-Update
Brara.A03383.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM5G855994 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G196301 No alias plant U-box 24 0.02 Orthogroups_2024-Update
Glyma.14G212200 No alias CYS, MET, PRO, and GLY protein 1 0.02 Orthogroups_2024-Update
HORVU6Hr1G089560.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
MA_10432179g0010 No alias (at3g52450 : 121.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
MA_10432813g0010 No alias (at3g52450 : 140.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
MA_17715g0010 No alias "(at1g66160 : 253.0) ""CYS, MET, PRO, and GLY protein... 0.02 Orthogroups_2024-Update
MA_6335g0010 No alias "(at5g64660 : 281.0) ""CYS, MET, PRO, and GLY protein... 0.02 Orthogroups_2024-Update
MA_8030489g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.02 Orthogroups_2024-Update
Pp1s67_203V6 No alias MLD14.11; U-box domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G186200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G367000.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 18 89
No external refs found!