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  5. Bradi3g45490

Bradi3g45490


Description : 3\'-5\'-exoribonuclease family protein


Gene families : OG_42_0004209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g45490
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
A4A49_13152 No alias exosome complex component rrp45b 0.04 Orthogroups_2024-Update
Cre03.g175000 No alias 3\'-5\'-exoribonuclease family protein 0.02 Orthogroups_2024-Update
Seita.1G189600.1 No alias component *(RRP45) of exosome EXO9 core complex 0.02 Orthogroups_2024-Update
Solyc05g047420 No alias Exosome complex component rrp45 (AHRD V3.3 *** W9RTK1_9ROSA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 193 259
IPR001247 ExoRNase_PH_dom1 32 164
No external refs found!