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Bradi3g46170


Description : ATP-dependent Clp protease


Gene families : OG_42_0001441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g46170
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Bradi3g10660 No alias CLP protease regulatory subunit X 0.02 Orthogroups_2024-Update
Brara.C01395.1 No alias unfoldase component *(ClpX) of mitochondrion Clp-type... 0.02 Orthogroups_2024-Update
Glyma.04G235600 No alias CLP protease regulatory subunit X 0.02 Orthogroups_2024-Update
Sobic.004G131040.1 No alias unfoldase component *(ClpX) of mitochondrion Clp-type... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 499 570
IPR003959 ATPase_AAA_core 288 492
No external refs found!