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  5. Bradi3g46590

Bradi3g46590


Description : cryptochrome 1


Gene families : OG_42_0001675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g46590
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
92414 No alias cryptochrome 2 0.02 Orthogroups_2024-Update
Glyma.13G089200 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
HORVU6Hr1G058740.2 No alias cryptochrome photoreceptor *(CRY) 0.02 Orthogroups_2024-Update
MA_10428291g0010 No alias (at4g08920 : 867.0) Encodes CRY1, a flavin-type... 0.03 Orthogroups_2024-Update
Sobic.006G101600.1 No alias cryptochrome photoreceptor *(CRY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 20 180
IPR020978 Cryptochrome_C 526 646
IPR005101 Cryptochr/Photolyase_FAD-bd 297 495
No external refs found!