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  5. Bradi3g47500

Bradi3g47500


Description : Hypoxia-responsive family protein


Gene families : OG_42_0002226 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g47500
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Brara.F02846.1 No alias component *(Cox-X1) of cytochrome c oxidase complex 0.03 Orthogroups_2024-Update
GRMZM2G041714 No alias Hypoxia-responsive family protein 0.03 Orthogroups_2024-Update
GRMZM2G159691 No alias Hypoxia-responsive family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G047000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g47670 No alias hypoxia-responsive family protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.7G328000.1 No alias component *(Cox-X1) of cytochrome c oxidase complex 0.03 Orthogroups_2024-Update
Sopen01g028330 No alias Hypoxia induced protein conserved region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007667 Hypoxia_induced_domain 18 67
No external refs found!