1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi3g47960

Bradi3g47960


Description : bromodomain and extraterminal domain protein 10


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g47960
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
A4A49_08932 No alias transcription factor gte4 0.01 Orthogroups_2024-Update
At1g06230 No alias Transcription factor GTE4... 0.02 Orthogroups_2024-Update
GRMZM2G127299 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Glyma.06G172300 No alias nuclear protein X1 0.02 Orthogroups_2024-Update
Glyma.12G209100 No alias global transcription factor group E4 0.04 Orthogroups_2024-Update
Glyma.13G292200 No alias global transcription factor group E4 0.04 Orthogroups_2024-Update
Glyma.15G060200 No alias global transcription factor group E7 0.03 Orthogroups_2024-Update
Glyma.16G062200 No alias global transcription factor group E8 0.03 Orthogroups_2024-Update
HORVU6Hr1G054560.6 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
HORVU7Hr1G118300.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Kfl00261_0010 kfl00261_0010_v1.1 (at3g52280 : 149.0) Bromodomain containing... 0.01 Orthogroups_2024-Update
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.03 Orthogroups_2024-Update
Potri.015G091800 No alias nuclear protein X1 0.03 Orthogroups_2024-Update
Seita.1G222200.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Seita.2G326000.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
evm.model.contig_3458.5 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00000632.12 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 167 250
IPR027353 NET_dom 312 377
No external refs found!