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  5. Bradi3g48880

Bradi3g48880


Description : CCT motif -containing response regulator protein


Gene families : OG_42_0004519 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g48880
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
A4A49_15373 No alias two-component response regulator-like aprr1 0.04 Orthogroups_2024-Update
Brara.C04252.1 No alias circadian clock evening oscillator component *(TOC1) of... 0.02 Orthogroups_2024-Update
Brara.I00658.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.04G166300 No alias CCT motif -containing response regulator protein 0.03 Orthogroups_2024-Update
Glyma.05G025000 No alias CCT motif -containing response regulator protein 0.04 Orthogroups_2024-Update
Glyma.06G196200 No alias CCT motif -containing response regulator protein 0.04 Orthogroups_2024-Update
Glyma.17G102200 No alias CCT motif -containing response regulator protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G057630.1 No alias circadian clock evening oscillator component *(TOC1) of... 0.03 Orthogroups_2024-Update
Kfl00059_0230 kfl00059_0230_v1.1 (at5g61380 : 198.0) Pseudo response regulator involved... 0.02 Orthogroups_2024-Update
LOC_Os02g40510 No alias response regulator receiver domain containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.1G236100.1 No alias circadian clock evening oscillator component *(TOC1) of... 0.06 Orthogroups_2024-Update
Sobic.004G216700.1 No alias circadian clock evening oscillator component *(TOC1) of... 0.05 Orthogroups_2024-Update
Solyc03g115770 No alias Timing of cab expression 1/pseudo-response regulator 1... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 447 489
IPR001789 Sig_transdc_resp-reg_receiver 35 146
No external refs found!