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  5. Bradi3g49250

Bradi3g49250


Description : PHE ammonia lyase 1


Gene families : OG_42_0000392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g49250
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
At5g04230 No alias Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:F4JW69] 0.02 Orthogroups_2024-Update
Bradi3g47110 No alias PHE ammonia lyase 1 0.02 Orthogroups_2024-Update
Brara.B00136.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00793.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Glyma.03G181600 No alias PHE ammonia lyase 1 0.04 Orthogroups_2024-Update
Glyma.13G145000 No alias PHE ammonia lyase 1 0.02 Orthogroups_2024-Update
Glyma.20G180800 No alias phenylalanine ammonia-lyase 2 0.04 Orthogroups_2024-Update
HORVU2Hr1G089440.4 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
LOC_Os04g43760 No alias phenylalanine ammonia-lyase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429279g0010 No alias (p24481|pal1_petcr : 914.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
MA_73113g0010 No alias (p45733|pal3_tobac : 734.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
Mp1g10150.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Orthogroups_2024-Update
Mp4g14130.1 No alias Phenylalanine ammonia-lyase class 1 (Fragment)... 0.02 Orthogroups_2024-Update
PSME_00011716-RA No alias (at3g10340 : 932.0) Encodes PAL4, a putative a... 0.02 Orthogroups_2024-Update
PSME_00022344-RA No alias (p45733|pal3_tobac : 833.0) Phenylalanine ammonia-lyase... 0.02 Orthogroups_2024-Update
PSME_00022739-RA No alias (at3g10340 : 547.0) Encodes PAL4, a putative a... 0.03 Orthogroups_2024-Update
PSME_00056212-RA No alias (p35513|pal2_tobac : 803.0) Phenylalanine ammonia-lyase... 0.04 Orthogroups_2024-Update
Potri.006G126800 No alias PHE ammonia lyase 1 0.07 Orthogroups_2024-Update
Potri.016G091100 No alias PHE ammonia lyase 1 0.07 Orthogroups_2024-Update
Pp1s43_79V6 No alias phenylalanine ammonia-lyase 0.02 Orthogroups_2024-Update
Seita.1G240300.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Seita.7G168700.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.004G220300.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.004G220400.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.004G220600.2 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Sobic.006G148800.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Solyc03g078270 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *-* PAL5_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g007900 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL5_SOLLC) 0.02 Orthogroups_2024-Update
Solyc09g007920 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL5_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 49 525
No external refs found!