Bradi3g49260


Description : PHE ammonia lyase 1


Gene families : OG_42_0000392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g49260
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
A4A49_26864 No alias phenylalanine ammonia-lyase 0.05 Orthogroups_2024-Update
A4A49_27559 No alias phenylalanine ammonia-lyase 0.05 Orthogroups_2024-Update
At2g37040 No alias Phenylalanine ammonia-lyase 1... 0.03 Orthogroups_2024-Update
Brara.B00136.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G029048 No alias PHE ammonia lyase 1 0.07 Orthogroups_2024-Update
GRMZM2G081582 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
GRMZM2G334660 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Glyma.10G058200 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Glyma.19G182300 No alias PHE ammonia lyase 1 0.04 Orthogroups_2024-Update
Glyma.20G180800 No alias phenylalanine ammonia-lyase 2 0.02 Orthogroups_2024-Update
HORVU2Hr1G089440.4 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.06 Orthogroups_2024-Update
HORVU2Hr1G089540.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.07 Orthogroups_2024-Update
HORVU6Hr1G058840.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.07 Orthogroups_2024-Update
Kfl00104_0290 kfl00104_0290_v1.1 (p53443|pal2_orysa : 261.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
LOC_Os12g33610 No alias phenylalanine ammonia-lyase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10429279g0010 No alias (p24481|pal1_petcr : 914.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
MA_123220g0010 No alias (p24481|pal1_petcr : 912.0) Phenylalanine ammonia-lyase... 0.02 Orthogroups_2024-Update
MA_44561g0010 No alias (p45729|pal3_petcr : 870.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
MA_73113g0010 No alias (p45733|pal3_tobac : 734.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
Mp1g05190.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Orthogroups_2024-Update
Mp4g10060.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Orthogroups_2024-Update
Mp4g14160.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Orthogroups_2024-Update
Mp4g14170.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Orthogroups_2024-Update
Mp4g14210.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Orthogroups_2024-Update
PSME_00011716-RA No alias (at3g10340 : 932.0) Encodes PAL4, a putative a... 0.06 Orthogroups_2024-Update
Potri.006G126800 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Potri.016G091100 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Pp1s22_3V6 No alias phenylalanine ammonia-lyase 0.03 Orthogroups_2024-Update
Pp1s36_253V6 No alias phenylalanine ammonia-lyase 0.02 Orthogroups_2024-Update
Pp1s43_79V6 No alias phenylalanine ammonia-lyase 0.02 Orthogroups_2024-Update
Pp1s500_4V6 No alias phenylalanine ammonia-lyase 0.03 Orthogroups_2024-Update
Pp1s52_44V6 No alias phenylalanine ammonia-lyase 0.04 Orthogroups_2024-Update
Seita.1G240300.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Seita.1G240600.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.09 Orthogroups_2024-Update
Seita.6G181000.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Seita.7G168700.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Seita.7G168800.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.07 Orthogroups_2024-Update
Sobic.004G220500.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.06 Orthogroups_2024-Update
Sobic.004G220700.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.006G148900.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.05 Orthogroups_2024-Update
Solyc05g056170 No alias phenylalanine ammonia-lyase 2 0.02 Orthogroups_2024-Update
Solyc10g086180 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL2_TOBAC) 0.02 Orthogroups_2024-Update
Sopen05g034580 No alias Aromatic amino acid lyase 0.04 Orthogroups_2024-Update
Sopen09g002740 No alias Aromatic amino acid lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009405 pathogenesis IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044419 interspecies interaction between organisms IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 65 538
No external refs found!