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  5. Bradi3g49340

Bradi3g49340


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g49340
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Brara.G00509.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.07G249400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G287500 No alias mitochondrial editing factor 22 0.02 Orthogroups_2024-Update
LOC_Os01g66160 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G237400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.2G091900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G177900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G203900.1 No alias RNA editing factor *(OTP87) 0.02 Orthogroups_2024-Update
Seita.4G216600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G124400.1 No alias RNA editing factor *(OTP81) 0.06 Orthogroups_2024-Update
Seita.7G205600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G477500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen05g018650 No alias PPR repeat family 0.01 Orthogroups_2024-Update
Sopen07g003070 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 258 308
IPR002885 Pentatricopeptide_repeat 361 408
IPR002885 Pentatricopeptide_repeat 436 462
IPR032867 DYW_dom 535 659
No external refs found!