Sopen07g007510

Description : Elongation factor TS

Gene families : OG_42_0004408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g007510
Cluster	HCCA clusters: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g05950	No alias	elongation factor Ts family protein	0.07	Orthogroups_2024-Update
Brara.A00816.1	No alias	translation elongation factor *(EF-Ts)	0.03	Orthogroups_2024-Update
Cre12.g519180	No alias	elongation factor Ts family protein	0.03	Orthogroups_2024-Update
GRMZM2G018868	No alias	elongation factor Ts family protein	0.02	Orthogroups_2024-Update
HORVU5Hr1G024470.1	No alias	translation elongation factor *(EF-Ts)	0.03	Orthogroups_2024-Update
MA_10436165g0010	No alias	(at4g29060 : 862.0) embryo defective 2726 (emb2726);...	0.03	Orthogroups_2024-Update
Mp2g23510.1	No alias	EF-Ts translation elongation factor	0.02	Orthogroups_2024-Update
Potri.018G083850	No alias	elongation factor Ts family protein	0.03	Orthogroups_2024-Update
Pp1s74_243V6	No alias	elongation factor ts	0.02	Orthogroups_2024-Update
Solyc07g018360	No alias	Elongation factor Ts (AHRD V3.3 *** K4CCP7_SOLLC)	0.02	Orthogroups_2024-Update
evm.model.tig00021319.56	No alias	(at4g29060 : 193.0) embryo defective 2726 (emb2726);...	0.02	Orthogroups_2024-Update
evm.model.tig00021464.7	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	InterProScan predictions
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003029	S1_domain	147	217
IPR003029	S1_domain	260	323
IPR014039	Transl_elong_EFTs/EF1B_dimer	649	791
IPR014039	Transl_elong_EFTs/EF1B_dimer	888	1031

External Links

No external refs found!