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  5. Bradi3g49970

Bradi3g49970


Description : myb domain protein 19


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g49970
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AC217264.3_FG005 No alias myb domain protein 101 0.02 Orthogroups_2024-Update
At1g66230 No alias Transcription factor MYB20... 0.02 Orthogroups_2024-Update
At5g16600 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SPG7] 0.02 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
Bradi3g36370 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.02 Orthogroups_2024-Update
Brara.H01853.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.05 Orthogroups_2024-Update
Brara.I05267.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G057027 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
GRMZM2G119693 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Glyma.09G206200 No alias myb domain protein 39 0.03 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
HORVU3Hr1G082210.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g18240 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g27090 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_51173g0010 No alias (at5g57620 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
Potri.013G056500 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Solyc05g007710 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRS5_SALMI) 0.03 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.03 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.02 Orthogroups_2024-Update
Sopen02g032700 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
evm.model.contig_2173.15 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0009405 pathogenesis IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0044419 interspecies interaction between organisms IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 62
IPR001005 SANT/Myb 69 113
No external refs found!