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  5. Bradi3g50160

Bradi3g50160


Description : GATA transcription factor 4


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g50160
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
A4A49_21972 No alias gata transcription factor 4 0.02 Orthogroups_2024-Update
At4g36620 No alias GATA transcription factor 19... 0.02 Orthogroups_2024-Update
Bradi1g37480 No alias GATA type zinc finger transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.G01643.1 No alias transcription factor *(A/B-GATA) 0.04 Orthogroups_2024-Update
Brara.K00682.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.K01308.1 No alias transcription factor *(A/B-GATA) 0.07 Orthogroups_2024-Update
GRMZM2G054615 No alias GATA transcription factor 5 0.03 Orthogroups_2024-Update
GRMZM2G104390 No alias GATA transcription factor 16 0.03 Orthogroups_2024-Update
Glyma.03G118100 No alias GATA transcription factor 2 0.02 Orthogroups_2024-Update
Glyma.08G202100 No alias GATA transcription factor 9 0.03 Orthogroups_2024-Update
HORVU6Hr1G093630.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g44400 No alias GATA zinc finger domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_82238g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.007G016600 No alias GATA transcription factor 5 0.02 Orthogroups_2024-Update
Potri.013G059600 No alias GATA transcription factor 12 0.02 Orthogroups_2024-Update
Sobic.004G337500.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Sobic.009G050600.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Solyc06g075140 No alias GATA transcription factor (AHRD V3.3 *-* A0A0J8C2J7_BETVU) 0.04 Orthogroups_2024-Update
Solyc08g066510 No alias GATA transcription factor (AHRD V3.3 *** K4CLM7_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g052460 No alias GATA zinc finger 0.02 Orthogroups_2024-Update
Sopen03g006450 No alias GATA zinc finger 0.02 Orthogroups_2024-Update
Sopen04g007430 No alias GATA zinc finger 0.05 Orthogroups_2024-Update
Sopen05g032000 No alias GATA zinc finger 0.02 Orthogroups_2024-Update
Sopen09g034220 No alias GATA zinc finger 0.02 Orthogroups_2024-Update
evm.model.tig00001094.21 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR000679 Znf_GATA 323 357
No external refs found!