Bradi3g50360

Description : WRKY family transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g50360
Cluster	HCCA clusters: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
29146	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
At2g03340	No alias	Putative WRKY DNA-binding protein...	0.03	Orthogroups_2024-Update
At4g26440	No alias	Probable WRKY transcription factor 34...	0.03	Orthogroups_2024-Update
At5g07100	No alias	Probable WRKY transcription factor 26...	0.04	Orthogroups_2024-Update
At5g46350	No alias	Probable WRKY transcription factor 8...	0.05	Orthogroups_2024-Update
Bradi1g30870	No alias	WRKY DNA-binding protein 18	0.04	Orthogroups_2024-Update
Bradi3g09810	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Brara.D00225.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.F02781.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G03696.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G005207	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
GRMZM2G012724	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
GRMZM2G111711	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
GRMZM2G139815	No alias	WRKY DNA-binding protein 30	0.03	Orthogroups_2024-Update
GRMZM5G823157	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Glyma.01G043300	No alias	WRKY DNA-binding protein 72	0.04	Orthogroups_2024-Update
Glyma.01G128100	No alias	WRKY DNA-binding protein 33	0.04	Orthogroups_2024-Update
Glyma.06G054500	No alias	WRKY DNA-binding protein 50	0.02	Orthogroups_2024-Update
Glyma.07G057400	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G034300	No alias	WRKY DNA-binding protein 23	0.04	Orthogroups_2024-Update
Glyma.09G080000	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.18G208800	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.20G028000	No alias	WRKY DNA-binding protein 3	0.03	Orthogroups_2024-Update
HORVU1Hr1G088300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G090110.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G069320.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G051970.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os01g08710	No alias	WRKY102, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g09080	No alias	WRKY107, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g30400	No alias	WRKY90, expressed	0.04	Orthogroups_2024-Update
LOC_Os10g18099	No alias	WRKY18, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g02420	No alias	WRKY97, expressed	0.04	Orthogroups_2024-Update
MA_11072g0010	No alias	(at1g68150 : 82.4) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_52928g0010	No alias	(at1g62300 : 129.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00035159-RA	No alias	(at1g29860 : 115.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00036209-RA	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.001G352400	No alias	WRKY DNA-binding protein 28	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.004G072000	No alias	WRKY DNA-binding protein 27	0.02	Orthogroups_2024-Update
Potri.005G085200	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Potri.006G105300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Potri.016G128300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Pp1s13_381V6	No alias	No description available	0.02	Orthogroups_2024-Update
Pp1s159_105V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.03	Orthogroups_2024-Update
Pp1s198_83V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.03	Orthogroups_2024-Update
Pp1s39_217V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.2G179800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.2G206000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G145000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G129700.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Seita.5G361600.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G381300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G174200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G200700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.008G107500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G206800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Solyc04g051690	No alias	WRKY transcription factor 51	0.03	Orthogroups_2024-Update
Solyc04g072070	No alias	WRKY transcription factor 55	0.03	Orthogroups_2024-Update
Solyc08g067360	No alias	WRKY transcription factor 45	0.05	Orthogroups_2024-Update
Sopen08g004130	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009539	photosystem II reaction center	IEP	Predicted GO
BP	GO:0015977	carbon fixation	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016984	ribulose-bisphosphate carboxylase activity	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	156	212

External Links

No external refs found!

Bradi3g50360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation