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  5. Bradi3g50390

Bradi3g50390


Description : Ribosomal protein L19 family protein


Gene families : OG_42_0002220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g50390
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Brara.H00935.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Brara.I01980.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Cre17.g734450 No alias Ribosomal protein L19 family protein 0.14 Orthogroups_2024-Update
Glyma.01G205400 No alias Ribosomal protein L19 family protein 0.05 Orthogroups_2024-Update
Glyma.11G037500 No alias Ribosomal protein L19 family protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G062040.3 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.23 Orthogroups_2024-Update
MA_947876g0010 No alias (at4g17560 : 107.0) Ribosomal protein L19 family... 0.06 Orthogroups_2024-Update
Mp3g02740.1 No alias component mtRPL19 of large ribosomal subunit proteome.... 0.02 Orthogroups_2024-Update
Potri.001G152200 No alias Ribosomal protein L19 family protein 0.07 Orthogroups_2024-Update
Pp1s10_389V6 No alias 50s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s44_176V6 No alias 50s ribosomal protein 0.04 Orthogroups_2024-Update
Seita.1G256000.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Sobic.004G298100.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Solyc08g078010 No alias Ribosomal protein L19 family protein (AHRD V3.3 *** AT4G17560.1) 0.07 Orthogroups_2024-Update
Sopen08g026520 No alias Ribosomal protein L19 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 119 212
No external refs found!