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  5. Bradi3g52320

Bradi3g52320


Description : Homeodomain-like superfamily protein


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g52320

Target Alias Description ECC score Gene Family Method Actions
At2g20400 No alias myb-like HTH transcriptional regulator family protein... 0.02 Orthogroups_2024-Update
Brara.B02368.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
Glyma.13G316600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G246200 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G108600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G102040.15 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G068100.2 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
LOC_Os03g20900 No alias Myb transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g41240 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os06g35140 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48596 No alias Myb transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g33750 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp7g11330.1 No alias G2-like GARP transcription factor 0.03 Orthogroups_2024-Update
PSME_00002495-RA No alias (at1g32240 : 135.0) Encodes a member of the KANADI... 0.02 Orthogroups_2024-Update
PSME_00007589-RA No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00007590-RA No alias (at2g38300 : 112.0) myb-like HTH transcriptional... 0.04 Orthogroups_2024-Update
PSME_00022449-RA No alias (at2g40260 : 137.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
Potri.001G133400 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G048000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G001200 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s331_44V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G195600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g007890 No alias Myb family transcription factor APL (AHRD V3.3 *** W9SPH9_9ROSA) 0.02 Orthogroups_2024-Update
Solyc06g066180 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen04g033180 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen09g034770 No alias MYB-CC type transfactor, LHEQLE motif 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 188 239
No external refs found!