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  5. Bradi3g52790

Bradi3g52790


Description : cryptochrome-interacting basic-helix-loop-helix 1


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g52790
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
At2g18300 No alias Basic helix-loop-helix (BHLH) DNA-binding superfamily... 0.02 Orthogroups_2024-Update
Brara.A00369.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
Brara.F02504.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Orthogroups_2024-Update
PSME_00034758-RA No alias (at1g68920 : 116.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Solyc06g072520 No alias bHLH transcription factor GBOF-1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 171 218
No external refs found!