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  5. Bradi3g54170

Bradi3g54170


Description : Ribosomal protein L39 family protein


Gene families : OG_42_0002686 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g54170
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
At3g02190 No alias 60S ribosomal protein L39-2... 0.03 Orthogroups_2024-Update
Brara.I04439.1 No alias component *(eL39) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
LOC_Os06g08320 No alias 60S ribosomal protein L39, putative, expressed 0.03 Orthogroups_2024-Update
Potri.018G022100 No alias Ribosomal protein L39 family protein 0.02 Orthogroups_2024-Update
Seita.1G351900.1 No alias component *(eL39) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000077 Ribosomal_L39 9 49
No external refs found!