Description : Histone superfamily protein
Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi3g54520 | |
Cluster | HCCA clusters: Cluster_143 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre06.g271376 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g275800 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g276550 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g709150 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g710450 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g711750 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G046841 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G141432 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G305027 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G306258 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G401147 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G141700 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G173400 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G058440.4 | No alias | histone *(H2B) | 0.04 | Orthogroups_2024-Update | |
HORVU3Hr1G013680.1 | No alias | histone *(H2B) | 0.04 | Orthogroups_2024-Update | |
HORVU6Hr1G087190.1 | No alias | histone *(H2B) | 0.05 | Orthogroups_2024-Update | |
MA_1040421g0010 | No alias | (at3g45980 : 114.0) Encodes a histone 2B (H2B) protein.... | 0.03 | Orthogroups_2024-Update | |
MA_10428006g0010 | No alias | (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... | 0.03 | Orthogroups_2024-Update | |
MA_10435143g0020 | No alias | (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... | 0.03 | Orthogroups_2024-Update | |
MA_10436516g0030 | No alias | (at3g45980 : 106.0) Encodes a histone 2B (H2B) protein.... | 0.02 | Orthogroups_2024-Update | |
MA_111473g0010 | No alias | (at3g46030 : 185.0) HTB11; FUNCTIONS IN: DNA binding;... | 0.03 | Orthogroups_2024-Update | |
MA_9293473g0010 | No alias | (at5g22880 : 173.0) Encodes a histone 2B (H2B) protein.... | 0.03 | Orthogroups_2024-Update | |
Mp4g13450.1 | No alias | histone (H2B) | 0.02 | Orthogroups_2024-Update | |
Seita.5G107300.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Seita.5G107600.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G092200.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
Solyc06g075800 | No alias | Histone H2B (AHRD V3.3 *** K4C9U5_SOLLC) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Predicted GO |
MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Predicted GO |
MF | GO:0005102 | signaling receptor binding | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
MF | GO:0008066 | glutamate receptor activity | IEP | Predicted GO |
MF | GO:0008083 | growth factor activity | IEP | Predicted GO |
BP | GO:0008283 | cell proliferation | IEP | Predicted GO |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Predicted GO |
MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
MF | GO:0022835 | transmitter-gated channel activity | IEP | Predicted GO |
MF | GO:0022836 | gated channel activity | IEP | Predicted GO |
MF | GO:0022839 | ion gated channel activity | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0030545 | receptor regulator activity | IEP | Predicted GO |
MF | GO:0030594 | neurotransmitter receptor activity | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
MF | GO:0038023 | signaling receptor activity | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
MF | GO:0048018 | receptor ligand activity | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
MF | GO:0060089 | molecular transducer activity | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 7 | 129 |
No external refs found! |