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  5. Bradi3g54987

Bradi3g54987


Description : phloem protein 2-B12


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g54987
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
At2g02250 No alias Putative F-box protein PP2-B2... 0.03 Orthogroups_2024-Update
Bradi3g15160 No alias phloem protein 2-B1 0.04 Orthogroups_2024-Update
Brara.F03423.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H00998.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G072570.3 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00034035-RA No alias (at4g19850 : 81.3) encodes a protein similar to phloem... 0.03 Orthogroups_2024-Update
Potri.015G120300 No alias phloem protein 2-B12 0.04 Orthogroups_2024-Update
Seita.1G361200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G123700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G375400.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G062500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 108 330
No external refs found!