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  5. Bradi3g54993

Bradi3g54993


Description : phloem protein 2-B2


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g54993
Cluster HCCA clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Bradi1g48273 No alias phloem protein 2-B11 0.03 Orthogroups_2024-Update
Bradi1g48275 No alias phloem protein 2-B11 0.03 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.02 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G233800 No alias phloem protein 2-B15 0.02 Orthogroups_2024-Update
PSME_00033255-RA No alias (at2g02240 : 94.7) maternal effect embryo arrest 66... 0.01 Orthogroups_2024-Update
PSME_00043920-RA No alias (at1g09155 : 152.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
PSME_00050415-RA No alias (at1g80110 : 126.0) phloem protein 2-B11 (PP2-B11);... 0.03 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g069020 No alias Phloem protein 2-like protein (AHRD V3.3 *** A0A103Y5W1_CYNCS) 0.02 Orthogroups_2024-Update
Sopen05g034270 No alias Phloem protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 31 73
No external refs found!