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  5. Bradi3g55020

Bradi3g55020


Description : phloem protein 2-B1


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g55020
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
A4A49_31344 No alias f-box protein 0.04 Orthogroups_2024-Update
At2g02350 No alias F-box protein SKIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FV02] 0.03 Orthogroups_2024-Update
Brara.B03101.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G090000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g56840 No alias OsFBX70 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.8G123700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G231200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen12g023290 No alias Phloem protein 2 0.02 Orthogroups_2024-Update
Sopen12g033010 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 104 292
No external refs found!