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  5. Bradi3g55100

Bradi3g55100


Description : Fatty acid hydroxylase superfamily


Gene families : OG_42_0000480 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g55100
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
A4A49_14587 No alias protein eceriferum 1 0.03 Orthogroups_2024-Update
Brara.B01190.1 No alias aldehyde-generating component *(CER3) of CER1-CER3... 0.03 Orthogroups_2024-Update
GRMZM2G114642 No alias Fatty acid hydroxylase superfamily 0.02 Orthogroups_2024-Update
Glyma.03G101800 No alias Fatty acid hydroxylase superfamily 0.03 Orthogroups_2024-Update
Glyma.12G148700 No alias beta-galactosidase 8 0.03 Orthogroups_2024-Update
HORVU6Hr1G029810.1 No alias aldehyde-generating component *(CER3) of CER1-CER3... 0.02 Orthogroups_2024-Update
HORVU6Hr1G089980.4 No alias aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.02 Orthogroups_2024-Update
MA_10435047g0010 No alias (at5g57800 : 583.0) encodes a transmembrane protein with... 0.03 Orthogroups_2024-Update
PSME_00001353-RA No alias (at5g57800 : 806.0) encodes a transmembrane protein with... 0.03 Orthogroups_2024-Update
PSME_00012546-RA No alias (at1g02205 : 552.0) Expression of the CER1 gene... 0.03 Orthogroups_2024-Update
Sopen01g035290 No alias WAX2 C-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
BP GO:0008610 lipid biosynthetic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031360 intrinsic component of thylakoid membrane IEP Predicted GO
CC GO:0031361 integral component of thylakoid membrane IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 137 274
IPR021940 Uncharacterised_Wax2_C 453 619
No external refs found!