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Description : RING/U-box superfamily protein
Gene families : OG_42_0000832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000832_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi3g55780 | |
| Cluster | HCCA clusters: Cluster_169 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At5g15790 | No alias | RING/U-box superfamily protein [Source:TAIR;Acc:AT5G15790] | 0.03 | Orthogroups_2024-Update | |
| Brara.D00929.1 | No alias | E3 ubiquitin ligase *(AIRP1) | 0.02 | Orthogroups_2024-Update | |
| Potri.001G101700 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.017G100100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Sopen05g006770 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
| BP | GO:0006281 | DNA repair | IEP | Predicted GO |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
| CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
| CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
| BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
| BP | GO:0030258 | lipid modification | IEP | Predicted GO |
| BP | GO:0030259 | lipid glycosylation | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
| BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
| BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024766 | Znf_RING_H2 | 120 | 165 |
| No external refs found! |