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  5. Bradi3g56300

Bradi3g56300


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g56300
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
A4A49_24130 No alias e3 ubiquitin-protein ligase ring1-like protein 0.03 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At5g64920 No alias CIP8 [Source:UniProtKB/TrEMBL;Acc:A0A178UJC6] 0.02 Orthogroups_2024-Update
Bradi3g37800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.I05006.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
GRMZM2G021480 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G251600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G072800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G082500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G002870.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00113_0130 kfl00113_0130_v1.1 (at5g20910 : 134.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00141_0100 kfl00141_0100_v1.... (at3g19950 : 102.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
LOC_Os11g04680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_219769g0010 No alias (at5g20910 : 155.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.002G085800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G087200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G065300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.6G190900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc02g065650 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 223 265
No external refs found!