1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi3g56490

Bradi3g56490


Description : B-box type zinc finger protein with CCT domain


Gene families : OG_42_0001800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001800_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g56490
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Brara.A02750.1 No alias BBX class-II transcription factor 0.03 Orthogroups_2024-Update
Brara.E03186.1 No alias BBX class-II transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G013398 No alias CONSTANS-like 9 0.02 Orthogroups_2024-Update
PSME_00037165-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.007G121200 No alias B-box type zinc finger protein with CCT domain 0.02 Orthogroups_2024-Update
Pp1s195_82V6 No alias sll2 protein 0.02 Orthogroups_2024-Update
Pp1s236_21V6 No alias sll2 protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 47 90
IPR010402 CCT_domain 336 378
No external refs found!