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  5. Bradi3g57087

Bradi3g57087


Description : DEAD/DEAH box RNA helicase family protein


Gene families : OG_42_0000769 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g57087
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
Kfl00080_0110 kfl00080_0110_v1.1 (at1g31360 : 693.0) Encodes a (d)NTP-dependent 3'->5'... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032284 RecQ_Zn-bd 363 435
IPR001650 Helicase_C 246 349
IPR011545 DEAD/DEAH_box_helicase_dom 41 206
No external refs found!