Bradi3g57305

Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Gene families : OG_42_0000180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g57305
Cluster	HCCA clusters: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g04772	No alias	Ribonuclease H-like superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g30448	No alias	Ribonuclease H-like superfamily protein	0.04	Orthogroups_2024-Update
Bradi2g37573	No alias	Ribonuclease H-like superfamily protein	0.04	Orthogroups_2024-Update
Bradi3g21294	No alias	Function unknown	0.03	Orthogroups_2024-Update
Bradi3g21421	No alias	Ribonuclease H-like superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g34611	No alias	Ribonuclease H-like superfamily protein	0.04	Orthogroups_2024-Update
Bradi4g18291	No alias	Polynucleotidyl transferase, ribonuclease H-like...	0.03	Orthogroups_2024-Update
Bradi4g27666	No alias	Ribonuclease H-like superfamily protein	0.04	Orthogroups_2024-Update
LOC_Os01g57170	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os03g41160	No alias	RNA-directed DNA polymerase, putative	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	InterProScan predictions
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	148	268

External Links

No external refs found!