Bradi3g59160

Description : Mitochondrial transcription termination factor family protein

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g59160
Cluster	HCCA clusters: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Glyma.18G107500	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G069340.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G003550.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
PSME_00009256-RA	No alias	(at1g62110 : 82.4) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00030169-RA	No alias	(at1g79220 : 119.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00038110-RA	No alias	(at5g64950 : 117.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
Seita.2G184700.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Seita.4G098400.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Sopen02g026650	No alias	mTERF	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	80	357

External Links

No external refs found!

Bradi3g59160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation