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  5. Bradi3g59680

Bradi3g59680


Description : Matrixin family protein


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g59680
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
A4A49_18776 No alias metalloendoproteinase 1-mmp 0.03 Orthogroups_2024-Update
At1g24140 No alias Metalloendoproteinase 3-MMP... 0.03 Orthogroups_2024-Update
Brara.G02449.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.02 Orthogroups_2024-Update
Brara.I01579.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.04 Orthogroups_2024-Update
Brara.I03188.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.04 Orthogroups_2024-Update
Glyma.01G036900 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.01G037100 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Glyma.02G028000 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.02G028200 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.02G028600 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Glyma.02G028800 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Potri.001G340700 No alias Matrixin family protein 0.02 Orthogroups_2024-Update
Potri.008G027500 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.008G028000 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.012G104600 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.013G100400 No alias Matrixin family protein 0.02 Orthogroups_2024-Update
Seita.4G105900.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.06 Orthogroups_2024-Update
Seita.9G325000.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.03 Orthogroups_2024-Update
Solyc05g006360 No alias Metalloendoproteinase 1, putative (AHRD V3.3 *** B9S2J2_RICCO) 0.02 Orthogroups_2024-Update
Sopen04g001060 No alias Matrixin 0.04 Orthogroups_2024-Update
Sopen04g001070 No alias Matrixin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0031012 extracellular matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 62 117
IPR001818 Pept_M10_metallopeptidase 165 326
No external refs found!