Bradi3g60120

Description : related to AP2 12

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g60120
Cluster	HCCA clusters: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
38502	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
A4A49_27755	No alias	ethylene-responsive transcription factor 1a	0.07	Orthogroups_2024-Update
A4A49_30642	No alias	ethylene-responsive transcription factor 15	0.05	Orthogroups_2024-Update
At2g23340	No alias	Ethylene-responsive transcription factor ERF008...	0.02	Orthogroups_2024-Update
At2g25820	No alias	Ethylene-responsive transcription factor ERF042...	0.03	Orthogroups_2024-Update
Brara.B03207.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
Brara.B03778.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Brara.E00876.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.E02695.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Brara.F03559.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.G02121.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Brara.I03288.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.04	Orthogroups_2024-Update
Brara.K00718.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Cre07.g353500	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
GRMZM2G110333	No alias	related to AP2 12	0.02	Orthogroups_2024-Update
Glyma.04G067200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.14G020100	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Mp4g00380.1	No alias	no hits & (original description: none)	0.04	Orthogroups_2024-Update
Potri.001G313500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G071666	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Potri.005G195000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G090600	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Pp1s38_257V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G027100.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G369100.3	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Solyc12g049560	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
BP	GO:0048193	Golgi vesicle transport	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	110	158

External Links

No external refs found!

Bradi3g60120

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation