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  5. Bradi3g60300

Bradi3g60300


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009590_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g60300
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
At5g38730 No alias Pentatricopeptide repeat-containing protein At5g38730... 0.03 Orthogroups_2024-Update
Seita.1G375500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g050550 No alias Pentatricopeptide repeat-containing protein, putative... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 455 488
IPR002885 Pentatricopeptide_repeat 355 403
IPR002885 Pentatricopeptide_repeat 249 298
IPR002885 Pentatricopeptide_repeat 132 191
IPR002885 Pentatricopeptide_repeat 217 247
IPR002885 Pentatricopeptide_repeat 323 350
No external refs found!