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  5. Bradi3g60420

Bradi3g60420


Description : replicon protein A2


Gene families : OG_42_0002547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002547_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g60420
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Cre02.g100000 No alias Replication protein A, subunit RPA32 0.02 Orthogroups_2024-Update
Pp1s357_53V6 No alias replication protein a2 0.02 Orthogroups_2024-Update
Seita.1G376600.1 No alias component *(RPA2) of RPA presynaptic filament assembly... 0.04 Orthogroups_2024-Update
Sobic.004G355500.1 No alias component *(RPA2) of RPA presynaptic filament assembly... 0.03 Orthogroups_2024-Update
Solyc07g018300 No alias Replication protein A subunit (AHRD V3.3 *** A0A1D1Z493_9ARAE) 0.02 Orthogroups_2024-Update
Sopen07g007450 No alias Replication protein A C terminal 0.02 Orthogroups_2024-Update
evm.model.tig00020684.26 No alias (at3g02920 : 90.9) RPA32B; FUNCTIONS IN: nucleic acid... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR014892 RPA_C 161 269
No external refs found!