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  5. Bradi3g60770

Bradi3g60770


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g60770
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
A4A49_10724 No alias ring-h2 finger protein atl33 0.02 Orthogroups_2024-Update
A4A49_20151 No alias putative ring-h2 finger protein atl61 0.02 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
A4A49_24308 No alias ring-h2 finger protein atl66 0.03 Orthogroups_2024-Update
A4A49_27114 No alias ring-h2 finger protein atl54 0.03 Orthogroups_2024-Update
A4A49_29197 No alias ring-h2 finger protein atl73 0.03 Orthogroups_2024-Update
A4A49_30300 No alias ring-h2 finger protein atl54 0.02 Orthogroups_2024-Update
A4A49_37314 No alias e3 ubiquitin-protein ligase atl9 0.02 Orthogroups_2024-Update
At1g53820 No alias RING-H2 finger protein ATL60... 0.03 Orthogroups_2024-Update
At1g76410 No alias ATL8 [Source:UniProtKB/TrEMBL;Acc:A0A178WF21] 0.03 Orthogroups_2024-Update
At3g62690 No alias RING-H2 zinc finger protein ATL5... 0.03 Orthogroups_2024-Update
At4g40070 No alias RING-H2 finger protein ATL32... 0.03 Orthogroups_2024-Update
At5g01880 No alias RING-H2 finger protein ATL74... 0.03 Orthogroups_2024-Update
Bradi1g29611 No alias RING-H2 finger A3A 0.04 Orthogroups_2024-Update
Bradi1g45727 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g05840 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g09395 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g44733 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g46030 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g13960 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g19490 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Brara.A02911.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B02021.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B02534.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B03540.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02317.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.03 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G00998.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H02311.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I02510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.J02673.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G015409 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G135011 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G386584 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G222300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G242500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G056000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G030900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G231900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G074210.1 No alias regulatory ubiquitin-protein ligase *(PRU2) 0.03 Orthogroups_2024-Update
HORVU3Hr1G028440.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU3Hr1G081150.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G081290.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G069980.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU5Hr1G082840.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G009820.3 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G077610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G036380.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os02g35329 No alias RING-H2 finger protein ATL3F, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g37740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g36500 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10431388g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10436028g0010 No alias (at5g01880 : 117.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_107765g0010 No alias (at1g72200 : 140.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_17390g0010 No alias (at3g61550 : 149.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_634100g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_69343g0010 No alias (at1g49230 : 137.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_77628g0010 No alias (at1g72310 : 116.0) Encodes a putative RING-H2 zinc... 0.05 Orthogroups_2024-Update
MA_80729g0030 No alias (at3g16720 : 139.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_8693914g0010 No alias (at5g05280 : 130.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_9143538g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.04 Orthogroups_2024-Update
MA_9515738g0010 No alias (at5g17600 : 145.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00003022-RA No alias (at1g72200 : 164.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00022170-RA No alias (at1g53820 : 134.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.001G400600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.002G006400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G054200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G049300 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
Pp1s14_360V6 No alias No description available 0.04 Orthogroups_2024-Update
Pp1s71_162V6 No alias ring finger 0.02 Orthogroups_2024-Update
Pp1s85_173V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.1G197400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G306600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.3G023500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.3G074900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G173000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.5G363700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G095300.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.03 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.8G248200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.9G373200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G109100.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G109200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G109600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G181400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.005G184100.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.006G092200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.006G100200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G175600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G110400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G110500.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.009G168900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G157300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.010G157500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc02g086950 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.02 Orthogroups_2024-Update
Solyc09g075320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT4G15975.1) 0.03 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.03 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g051390 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.contig_2102.17 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00000367.17 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 113 159
No external refs found!