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  5. Bradi4g02117

Bradi4g02117


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0008601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g02117
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G018330.2 No alias RNA editing factor *(COD1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 190 218
IPR002885 Pentatricopeptide_repeat 256 282
IPR002885 Pentatricopeptide_repeat 380 407
IPR002885 Pentatricopeptide_repeat 554 578
IPR002885 Pentatricopeptide_repeat 132 160
IPR002885 Pentatricopeptide_repeat 102 126
IPR002885 Pentatricopeptide_repeat 453 475
IPR002885 Pentatricopeptide_repeat 318 346
IPR002885 Pentatricopeptide_repeat 69 99
IPR002885 Pentatricopeptide_repeat 38 65
IPR002885 Pentatricopeptide_repeat 163 185
IPR002885 Pentatricopeptide_repeat 349 377
IPR002885 Pentatricopeptide_repeat 7 36
IPR002885 Pentatricopeptide_repeat 478 526
IPR002885 Pentatricopeptide_repeat 223 254
No external refs found!