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  5. Bradi4g02587

Bradi4g02587


Description : eukaryotic translation initiation factor 2 gamma subunit


Gene families : OG_42_0003024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g02587
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Brara.I05506.1 No alias component *(eIF2-gamma) of eIF2 Met-tRNA binding factor complex 0.03 Orthogroups_2024-Update
Glyma.08G171500 No alias eukaryotic translation initiation factor 2 gamma subunit 0.05 Orthogroups_2024-Update
Glyma.15G255900 No alias eukaryotic translation initiation factor 2 gamma subunit 0.04 Orthogroups_2024-Update
HORVU5Hr1G018660.1 No alias component *(eIF2-gamma) of eIF2 Met-tRNA binding factor complex 0.07 Orthogroups_2024-Update
Kfl00206_0240 kfl00206_0240_v1.1 (at1g04170 : 800.0) protein synthesis initiation factor... 0.02 Orthogroups_2024-Update
LOC_Os12g41400 No alias eukaryotic translation initiation factor 2 subunit... 0.03 Orthogroups_2024-Update
MA_6993g0010 No alias (at1g04170 : 820.0) protein synthesis initiation factor... 0.03 Orthogroups_2024-Update
Mp1g04790.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.05 Orthogroups_2024-Update
Seita.6G007200.1 No alias component *(eIF2-gamma) of eIF2 Met-tRNA binding factor complex 0.04 Orthogroups_2024-Update
Sobic.002G341800.1 No alias component *(eIF2-gamma) of eIF2 Met-tRNA binding factor complex 0.07 Orthogroups_2024-Update
Solyc01g066690 No alias eukaryotic translation initiation factor 2 gamma subunit... 0.08 Orthogroups_2024-Update
Solyc05g054310 No alias eukaryotic translation initiation factor 2 gamma subunit... 0.06 Orthogroups_2024-Update
Solyc12g099470 No alias eukaryotic translation initiation factor 2 gamma subunit... 0.02 Orthogroups_2024-Update
Sopen12g034140 No alias Elongation factor Tu GTP binding domain 0.11 Orthogroups_2024-Update
evm.model.tig00021433.27 No alias (at1g04170 : 690.0) protein synthesis initiation factor... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 32 236
IPR015256 TIF2_gsu_C 362 451
IPR004161 EFTu-like_2 268 350
No external refs found!