Description : RING/U-box superfamily protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi4g02830 | |
Cluster | HCCA clusters: Cluster_274 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g22650 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g09395 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.B02994.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Glyma.08G271100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.17G028400 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Orthogroups_2024-Update | |
HORVU0Hr1G021450.9 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G051480.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G051510.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
PSME_00054098-RA | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
Potri.003G073300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.3G227200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.4G171200.1 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
Sobic.004G110300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.005G012100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc01g088440 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
BP | GO:0009725 | response to hormone | IEP | Predicted GO |
BP | GO:0009733 | response to auxin | IEP | Predicted GO |
BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
MF | GO:0030410 | nicotianamine synthase activity | IEP | Predicted GO |
BP | GO:0030417 | nicotianamine metabolic process | IEP | Predicted GO |
BP | GO:0030418 | nicotianamine biosynthetic process | IEP | Predicted GO |
CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Predicted GO |
CC | GO:0031361 | integral component of thylakoid membrane | IEP | Predicted GO |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
MF | GO:0071949 | FAD binding | IEP | Predicted GO |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 183 | 226 |
No external refs found! |